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Secretory pathway of the filamentous fungus Trichoderma reesei

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posted on 28.03.2022, 17:39 authored by Hong Yu
"Bottlenecks for overproduction of proteins in filamentous fungi possibly exist within the secretory pathway, therefore better understanding of this pathway is a key to achieving better yields. “Visible” data with high spatial and temporal resolution of morphology of the hyphal compartments, protein localisation, expression and secretion would need to be added to the existing knowledge to help understand protein secretion and to devise strategies for the improvement of protein production. A series of expression plasmids/cassettes containing a gene encoding the fluorescent protein(s) GFP2 and/or VenusYFP alone or fused to the ER-resident folding chaperone Bip1 and the main cellobiohydrolase I (CBHI) were constructed and introduced into a Trichoderma reesei strain Rut C-30. A transformant strain BV47 expressing the Bip1-Venus fusion protein was applied to visualise the endoplasmic reticulum and potential changes in the ER during Bip1-Venus overexpression. A transformant strain CV48 secreting the main cellobiohydrolase I of T. reesei fused with VenusYFP was used to monitor secretion of the CBHI-Venus fusion protein. In order to investigate the potential interaction between the Bip1 and the secretory protein CBHI, a GFP2/VenusYFP FRET pair system was developed. In the developed FRET system, the transformant strains BG29 expressing Bip1-GFP2, CV48 expressing CBHI-Venus, VG15 expressing Venus-GFP2 and BGCV101 coexpressing Bip1-GFP2 served as the donor, the acceptor, the positive FRET control and the FRET sample, respectively. The ER in the host strain T. reesei Rut C-30 was visualised as a typical network of parallel tubular membranes and some punctate-like bodies through the hyphae. The ER structure in the transformant BV47 expressing the Bip1-Venus fusion protein appeared unusual with an abundance of punctate structures and fewer tubular membranes demonstrating modified spatial organisation of the ER, different to what has been seen in other filamentous fungi studied so far. This type of modification of the ER may assist in forming an ER sub-domain to which overproduced and potentially misfolded proteins can be deposited to wait for further processing. The ER structural modifications appeared to have been caused by overproduction of the BiP1-Venus fusion protein. In addition to the changes in the ER morphology in T. reesei, it was also noted that BiP1 appeared to have escaped from the ER and become secreted into the culture medium, possibly due to overloading of the ER retention capability. Light microscopy and immunoelectron microscopy studies confirmed that the Golgi apparatus in T. reesei appeared in punctate bodies that were not surrounded with obvious membranes. The Golgi membrane invisibility could be associated with the chemical fixation method used in this study which failed to preserve the delicate Golgi membranes. The morphological characteristics of the Golgi apparatus in T. reesei observed in this study were different to those previously reported for T. reesei and yeast and were likely due to different methods for sample preparation and observation i.e. immunoelectron microscopy staining or ultrastructural observation without specific staining. Secretion of the CBHI-Venus fusion protein in the T. reesei transformant CV48 was tracked both intracellularly and extracellularly. Intracellular fluorescence of CBHI-Venus in CV48 was detected at the 12 h time point and was in line with the detection of cbh1-venus transcript at 12 h. There was a 6 h time lag between the first presence of intracellular fluorescence and the detectable level of CBHI-Venus in the culture supernatant at 12 h. Subcellular localisation of the fusion protein was studied by both light microscopy and immunoelectron microscopy. In addition to association with a typical ER network, the CBHI-Venus protein was found localised in distorted ER membrane structures assumed as ER-derived sub-domains similar to what seen in the BV47 overexpressing BiP1-Venus at both 24 and 48 h. The modification of the ER organisation and formation of ER sub-domains in the CV48 transformant with at least two copies of venus gene was assumed as a result of overexpression of the fusion protein. At the early culture stages of 24 and 48 h, CBHI-Venus also localised in the vesicles and Golgi bodies. After 24 h, the protein concentrated into the secretory vesicles for transport. Interestingly, the fusion protein was retained in the cell wall since 72 h, which was possibly the cause for reduction of secretion into the culture medium at the later stages of cultivation. Vacuolation of the hyphae occurred at 120 h. In general, secretion of the fusion protein CBHI-Venus follows the conventional secretory pathway through the ER to Golgi via secretory vesicles. In this study, a FRET system was developed to analyse the interaction between the ER-resident chaperone BiP1 and the highly secreted protein CBHI using GFP2 and VenusYFP as fusion partners to CBHI and BiP1. The positive control, transformant VG15 expressing venus-gfp2 demonstrated positive FRET signals although at a considerably low level. However the transformant BGCV101 coexpressing BiP-GFP2 and CBHI-Venus did not show significant FRET efficiency. This observation could be a result of multiple reasons as discussed in the thesis. The FRET work conducted here will aid in developing an efficient FRET tool for studying protein interactions in living filamentous fungi." -- Abstract

History

Table of Contents

1. Introduction -- 2. Materials and methods -- 3. Expression of fluorescent proteins GFP2 and VenusYFP in Trichoderma reesei -- 4. Optimisation of sample preparations for microscopy studies -- 5. Optimisation of the culture medium - the effect of initial medium pH on the expression of the CBHI-Venus fusion protein -- 6. Visualisation of the major organelles in secretory pathway of the filamentous fungus Trichoderma reesei -- 7. Tracking secretion of the cellobiohydrolase I (CBHI)-Venus fusion protein through the hyphae of Trichoderma reesei -- 8. Visualisation of protein interactions between BiP1 and CBHI in T. reesei -- 9. Summary and concluding discussion -- Appendix.

Notes

Bibliography: pages 206-240 "This thesis is presented in fulfilment of the requirements for the degree of Doctor of Philosophy".

Awarding Institution

Macquarie University

Degree Type

Thesis PhD

Degree

PhD, Macquarie University, Faculty of Science, Department of Chemistry and Biomolecular Sciences

Department, Centre or School

Department of Chemistry and Biomolecular Sciences

Year of Award

2009

Principal Supervisor

Helena Nevalainen

Additional Supervisor 1

Ewa Goldys

Additional Supervisor 2

Junior T'eo

Rights

Copyright disclaimer: http://www.copyright.mq.edu.au Copyright Hong Yu 2009

Language

English

Extent

1 online resource (xx, 224 pages) illustrations (some coloured)

Former Identifiers

mq:30303 http://hdl.handle.net/1959.14/283583 2128918